UltraScan III
List of all members | Public Member Functions | Public Attributes
US_Model::SimulationComponent Class Reference

Simulation component (solute/analyte) class Each analyte in the model is a component. A sedimenting solute can also be a component. More...

#include "us_model.h"

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Public Member Functions

 SimulationComponent ()
 
bool operator== (const SimulationComponent &) const
 A test for identical components. More...
 
bool operator!= (const SimulationComponent &sc) const
 A test for unequal components. More...
 

Public Attributes

QString analyteGUID
 GUID for the analyte in the DB. More...
 
double molar_concentration
 Signal attenuation, molar basis. More...
 
double signal_concentration
 Analyte concentration. More...
 
double vbar20
 Analyte specific volume. More...
 
double mw
 Analyte molecular weight. More...
 
double s
 Sedimentation coefficient. More...
 
double D
 Diffusion coefficient. More...
 
double f
 Frictional coefficient. More...
 
double f_f0
 Frictional ratio. More...
 
double extinction
 
double axial_ratio
 Ratio of major/minor shape axes. More...
 
double sigma
 Concentration dependency of s. More...
 
double delta
 Concentration dependency of D. More...
 
int oligomer
 
ShapeType shape
 Classification of shape. More...
 
QString name
 Descriptive name. More...
 
int analyte_type
 Protein, RNA, DNA, Corbohydrate, etc. More...
 
MfemInitial c0
 

Detailed Description

Simulation component (solute/analyte) class Each analyte in the model is a component. A sedimenting solute can also be a component.

Definition at line 194 of file us_model.h.

Constructor & Destructor Documentation

US_Model::SimulationComponent::SimulationComponent ( )

Definition at line 9 of file us_model.cpp.

Member Function Documentation

bool US_Model::SimulationComponent::operator!= ( const SimulationComponent sc) const
inline

A test for unequal components.

Definition at line 203 of file us_model.h.

bool US_Model::SimulationComponent::operator== ( const SimulationComponent sc) const

A test for identical components.

Definition at line 33 of file us_model.cpp.

Member Data Documentation

int US_Model::SimulationComponent::analyte_type

Protein, RNA, DNA, Corbohydrate, etc.

Definition at line 224 of file us_model.h.

QString US_Model::SimulationComponent::analyteGUID

GUID for the analyte in the DB.

Definition at line 206 of file us_model.h.

double US_Model::SimulationComponent::axial_ratio

Ratio of major/minor shape axes.

Definition at line 217 of file us_model.h.

MfemInitial US_Model::SimulationComponent::c0
            The radius/concentration points for a

user-defined initial concentration grid

Definition at line 225 of file us_model.h.

double US_Model::SimulationComponent::D

Diffusion coefficient.

Definition at line 212 of file us_model.h.

double US_Model::SimulationComponent::delta

Concentration dependency of D.

Definition at line 219 of file us_model.h.

double US_Model::SimulationComponent::extinction
         Coefficient of light extinction

at model wavelength

Definition at line 215 of file us_model.h.

double US_Model::SimulationComponent::f

Frictional coefficient.

Definition at line 213 of file us_model.h.

double US_Model::SimulationComponent::f_f0

Frictional ratio.

Definition at line 214 of file us_model.h.

double US_Model::SimulationComponent::molar_concentration

Signal attenuation, molar basis.

Definition at line 207 of file us_model.h.

double US_Model::SimulationComponent::mw

Analyte molecular weight.

Definition at line 210 of file us_model.h.

QString US_Model::SimulationComponent::name

Descriptive name.

Definition at line 223 of file us_model.h.

int US_Model::SimulationComponent::oligomer
    Molecule count for this experiment

(e.g. dimer = 2)

Definition at line 220 of file us_model.h.

double US_Model::SimulationComponent::s

Sedimentation coefficient.

Definition at line 211 of file us_model.h.

ShapeType US_Model::SimulationComponent::shape

Classification of shape.

Definition at line 222 of file us_model.h.

double US_Model::SimulationComponent::sigma

Concentration dependency of s.

Definition at line 218 of file us_model.h.

double US_Model::SimulationComponent::signal_concentration

Analyte concentration.

Definition at line 208 of file us_model.h.

double US_Model::SimulationComponent::vbar20

Analyte specific volume.

Definition at line 209 of file us_model.h.


The documentation for this class was generated from the following files: